• Nanopore Sequencing Takes More Small Steps

    Bio-IT World | New research from Mark Akeson and colleagues at UCSC shows that the decade long goal of sequencing DNA by passing an intact single strand of DNA through a protein nanopore is edging closer to reality. 

    Dec 2, 2010

  • Phylogenetics for Facebook?

    Bio-IT World | A pattern-matching puzzle created by bioinformaticians at McGill University lets players sort genetic code. The game, called Phylo, takes advantage of the human brain's efficiency at recognizing and sorting patterns to tackle multiple sequence alignments.

    Dec 1, 2010

  • Survey Says Drug Makers Still Frustrated

    San Diego Union Tribune | Life science companies are irked by the FDA's lengthy drug review process, increasing fees, and issues raised late in the process according to a PricewaterhouseCoopers survey released yesterday.

    Nov 30, 2010

  • LIMS Made Freely Available to DNA Barcoding Community

    Bio-IT World | SINGAPORE—The Moorea Biocode Project, a species inventory of the island of Moorea, is making publicly available its LIMS as a free beta version. The Moorea Biocode Project aims to create a comprehensive inventory of all of the coral reef and terrestrial species on Moorea larger than a microbe. The Biocode LIMS and data analysis components of the project were developed by Biomatters in collaboration with the Biocode Project researchers as a plugin for Biomatters’ Geneious Pro sequence analysis software.

    Nov 29, 2010

  • Chasing Exascale

    PC World | There's an international race to build an exascale computer--a project that is estimated to cost billions of dollars. At the Department of Energy, Peter Beckman is leading the effort.

    Nov 28, 2010

  • Melanoma Methods of Resistance

    Nature News | Two studies published in Nature reveal why promising melanoma drug PLX4032 fails in some patients and how tumors' resistance to the drug may be overcome.

    Nov 24, 2010

  • Microsoft Cofounder Invests $9.4 Million in Biotech, Neuroscience

    Boston Globe | Paul Allen, cofounder of Microsoft, is funding biotech with $9.4 million in grants. The Paul G. Allen Family Foundation has awarded seven three-year grants to Allen Distinguished Investigators, in what could become an ongoing program. The grants are focused on biotech and basic neuroscience and are meant for cutting-edge research projects.

    Nov 22, 2010

  • IBM Takes Top Green Honors at SC2010

    PC World | China may have taken top honors in the most recent Top500 listing, but IBM walked away with another award: the world's most energy-efficient supercomputer.

    Nov 21, 2010

  • Ignite Institute Moves to Philadelphia

    Washington Business Journal | The Ignite Institute, originally planned for Northern Virginia, appears to be headed instead to Philadelphia and the Fox Chase Cancer Center.

    Nov 17, 2010

  • Microsoft’s Azure Cloud BLASTs a Challenge to Amazon

    Bio-IT World | Backing up the claim that cloud computing is its top strategic priority, Microsoft marked the beginning of this year’s Supercomuting conference (SC10) that by porting the sequence aligner BLAST to Windows Azure, it is releasing a major protein dataset that should not only be of value to researchers in its own right but also demonstrate the potential value of Microsoft’s Azure Cloud to the bioscience community.

    Nov 16, 2010

  • Hollywood Biology

    New York Times | Dr. Robert Lue of Harvard is animating the cell. A pioneer in molecular animation, Lue and others are applying computer-based animation from the film industry to biology.

    Nov 16, 2010

  • A Turnaround for Toxicogenomics?

    Bio-IT World | With a 90% drug attrition rate in clinical trials due primarily to the high incidence of adverse effects, there is a huge financial incentive for drug companies to develop methods that will quickly eliminate toxic compounds from the drug pipelines.

    Nov 15, 2010

  • Chinese Supercomputer Ranked Top in the World by Top500

    InformationWeek | China bests the US in the most recent Top500 list of the fastest supercomputers in the world. China's Tianhe-1A system in Tianjin achieved 2.57 petaflops per second to earn first place.

    Nov 15, 2010

  • EMC Buys Isilon for $2.25 billion

    Bloomberg | EMC announced yesterday that it had purchased Isilon Systems for $2.25 billion, pushing it deeper into the external-storage market.

    Nov 15, 2010

  • Complete Genomics' IPO Less Than Expected

    Xconomy | Complete Genomics' IPO this week came in lower than they had expected. Originally predicting $12-$14 per share, the initial prices was $9 per share and stock fell 11% the first day of trading, closing at $8.03.

    Nov 11, 2010

  • Gene Mutation Determines Patient Response to AML

    Med Page Today | Findings published in the New England Journal of Medicine pinpoint a gene with multiple mutations that seems to determine patient response to acute myeloid leukemia (AML).

    Nov 11, 2010

  • Futreal's Deeper and Wider Approach to Cancer Genomes

    Bio-IT World | Cancer researcher Andy Futreal at the Wellcome Trust Sanger Institute believes there is plenty of cause for optimism when it comes to sequencing cancer genomes. Speaking at the Frontiers in Cancer Science 2010 meeting in Singapore, Futreal catalogued the cancer advances over the past ten years of genome sequencing, and proposed future directions for the field.

    Nov 10, 2010

  • 454 Enters Partnership for Sequencing Semiconductor

    Bio-IT World | DNA Electronics and 454 Life Sciences have entered a partnership to develop a low-cost, high-throughput, long read, high density DNA sequencing system. The technology is expected to build on 454's current pyrosequencing-based platform.

    Nov 4, 2010

  • Biomatters Launches Next Gen Analysis Server

    Bio-IT World | Biomatters launched their newest software package yesterday, Geneious Server, to analyze next-generation sequencing data, and it's already found customers in Centers for Disease Control and Prevention (CDC) in Atlanta and Walter Reed Army Institute of Research in Maryland.

    Nov 3, 2010

  • Lander’s Lessons Ten Years after the Human Genome Project

    Bio-IT World | If anyone was capable of distilling the lessons learned in the ten years since the first draft of the Human Genome Project in 2000, it was Broad Institute director Eric Lander in the opening address at the annual American Society of Human Genetics (ASHG) convention in Washington, D.C.

    Nov 2, 2010